Mutyper

PANAMutyper™ R technology is based on peptide nucleic acid (PNA)-mediated real-time PCR clamping and melting peak analysis technology. By using wild type DNA specific PNA clamp probe, the amplification of the wild type DNA is suppressed. In addition, by using mutant type DNA specific PNA detection probe which has fluorescent dye and quencher, a single mutation can be genotyped by melting peak analysis.
Therefore, PANAMutyper™ R technology can detect a single base mutation accurately with high sensitivity for only a minute amount of mutant type DNA, such as the samples from blood. It is also very fast and convenient method for detecting mutant.

MutyperR assay kit for mutation detection – PNA Bio

PNA-based MutyperR kit with high sensitivity – PNA Bio

Reliable MutyperR kit for research applications – PNA Bio

Lung cancer is a metastatic cancer which the cancer cells are developed in the bronchial tubes or alveoli and grow along the blood vessel or lymphatic vessel. There are two types of lung cancer based on the sizes and shape of the cancer cell; non-small cell lung cancer (NSCLC) takes 75% and small cell lung cancer takes 25%. Usually, it is hard to find lung cancer in the early stage and is diagnosed as lung cancer when it is already progressed. So the prognosis tends to be bad. It is known that the patients with EGFR mutation show very high drug responses against EGFR tyrosine kinase inhibitor (TKI) such as Gefitinib (Iressa, AstraZenca) and Erlotinib (Tarceba, Roche). We expect that genotyping EGFR genes of the lung cancer patients enables predicting drug response before treatment and this will lead effective lung cancer treatment.

 

PANAMutyper™ R EGFR

Product Name Cat No. Size
PANAMutyper™ R EGFR (47 Mutations) PNAR-3001 24 tests

EGFR Mutation Details

No. Reagent Exon Amino Acid Change Nucleotide change Cosmic No.
1 G719 E18 G719A c.2156G>C 6239
2 G719S c.2155G>A 6252
3 G719C c.2155G>T 6253
4 E19del A 19 p.E746_A750del c.2235_2249 del 15 6223
5 p.E746_A750del c.2236_2250 del 15 6225
6 p.E746_T751>IP c.2235_2251>AATTC 13552
7 p.K745_E749del c.2233_2247 del 15 26038
8 p.E746_T751>I c.2235_2252 AAT (complex) 13551
9 p.E746_A750del c.2235_2248>AATTC 13550
10 p.L747_S752>Q c.2239_2256>CAA 12403
11 p.S752_I759del c.2253_2276 del 24 12416
12 p.E746_T751>VA c.2237_2253>TTGCT 12422
13 p.E746_T751>A c.2237_2251 del 15 12678
14 p.L747_T751del c.2239_2253 del 15 6254
15 p. L747_T751del c.2238_2252 del 15 23571
16 p.L747_T751>Q c.2238_2252>GCA(complex) 12419
17 E19del B 19 p.L747_T751del c.2240_2254 del 15 12369
18 p.L747_T751del c.2239_2253 del 15 6254
19 p.E746_T751>V c.2237_2252>T 12386
20 p.E746_S752>I c.2235_2255>AAT 12385
21 p.L747_T751del c.2238_2252 del 15 23571
22 p.E746_T751del c.2236_2253 del 18 12728
23 p.E746_S752>A c.2237_2254 del 18 12367
24 p.E746_S752>V c.2237_2255>T (complex) 12384
25 p.E746_S752>D c.2238_2255 del 18 6220
26 p.L747_A750>P c.2238_2248>GC(complex) 12422
27 p.L747_E749del c.2239_2247 del 9 6218
28 p.L747_S752del c.2239_2256 del 18 6255
29 p.L747_ A750>P c.2239_2248 TTAAGAGAAG>C 12382
30 p.L747_P753>Q c.2239_2258>CA(complex) 12387
31 p.L747_T751>S c.2240_2251 del 12 6210
32 p.L747_P753>S c.2240_2257 del 18 12370
33 p.L747_T751>P c.2239_2251>C(complex) 12383
34 p.E746_P753>VS c.2237_2257>TCT 18427
35 S768I 20 S768I c.2303G>T 6241
36 T790M 20 T790M c.2369C>T 6240
37 E20ins A 20 p.D770_N771insG c.2310_2311 insGGT 12378
38 p.P772_H773insTTP c.2315_2316 insGACAACCCC
39 p.P772_H773insGNP c.2315_2316 insGGGCAACCC
40 p.V769_N770insASV c.2309_2310 AC>CCAGCGTGGAT 13558
41 E20ins B 20 p.V769_D770insASV c.2307_2308 ins GCCAGCGTG 12376
42 p.H773_V774insH c.2319_2320 insCAC 12377
43 p.H773L c.2318 A>T 13005
44 p.H773_V774insPH c.2319_2320 insCCCCAC 12380
45 p.V774_C775insHV c.2321_2322 insCCACGT 18432
46 p.D770_N771insSVD c.2311_2312 ins GCGTGGACA 13428
47 L858R 21 L858R c.2573T>G 6224
48 L858R c.2573_2574 TG>GT 12429
49 L861Q L861Q c.2582T>A 6213

KRAS mutation is found in several cancers such as pancreatic cancer, colorectal cancer, lung cancer, biliary tract cancer and thyroid cancer. The existence of KRAS mutations is often related with a prognostic marker to drug response. For example, KRAS mutation is considered a strong prognostic marker for drug response of tyrosine kinase inhibitors such as Gefitinib (Iressa) or Erlotinib (Tarceva).Recently, KRAS mutation is often detected in colorectal cancer and may be related with drug responseto Cetuximab (Erbitux) or Panitumumab (Vectibix) that is used for colon cancer therapy. Therefore,examination of KRAS mutation is needed to determine drug resistance of patients with colorectal or lung cancers and will be helpful for cancer therapies.

PANAMutyper™ R KRAS

Product Name Cat No. Size
PANAMutyper™ R KRAS (29 Mutations) PNAR-1001 24 tests

KRAS Mutation Details

No. Reagent Codon Amino Acid Change Nucleotide change Cosmic No.
1 KC12a 12 p.G12A c.35G>C 522
2 p.G12V c.35G>T 520
3 p.G12R c.34G>C 518
4 p.G12C c.34G>T 516
5 KC12b p.G12D c.35G>A 521
6 p.G12S c.34G>A 517
7 7 13 p.G13A c.38G>C 533
8 p.G13V c.38G>T 534
9 p.G13R c.37G>C 529
10 p.G13C c.37G>T 527
11 KC13b p.G13D c.38G>A 532
12 p.G13S c.37G>A 528
13 KC59 59 p.A59T c.175G>A 546
14 p.A59E c.176C>A 547
15 p.A59G c.176C>G 28518
16 KC61 61 p.Q61K c.181C>A 549
17 p.Q61E c.181C>G 550
18 p.Q61P c.182A>C 551
19 p.Q61R c.182A>G 552
20 p.Q61L c.182A>T 553
21 p.Q61H c.183A>C 554
22 p.Q61H c.183A>T 555
23 KC117 117 p.K117E c.349A>G 1360831
24 p.K117N c.351A>C 19940
25 p.K117N c.351A>T 28519
26 KC146 146 p.A146T c.436G>A 19404
27 p.A146P c.436G>C 19905
28 p.A146G c.437C>G 1360829
29 p.A146V c.437C>T 19900

NRAS mutation is found in several cancers such as melanoma (13~25%), colorectal cancer (1~6%), lung cancer (1%), thyroid cancer (7%) and hepatocellular carcinoma (10%). It is know that the drug response against colorectal cancer medicine such as Erbitux and Cetuximab decreased and the prognosis of the metastatic colorectal cancer patient is bad if the patient has NRAS mutation. Recently, there are some papers that report the drug responses can be different for the NRAS mutation type so it is important to genotype each mutation. NRAS gene mutation genotyping test is necessary especially for predicting the drug sensitivity and prognosis. This test expected to play a major role for predicting the treatment of the patients and prognosis.

 

PANAMutyper™ R NRAS

Product Name Cat No. Size
PANAMutyper™ R NRAS (31 Mutations) PNAR-1101 24 tests

NRAS Mutation Details

No. Reagent Codon Amino Acid Change Nucleotide change Cosmic No.
1 NC12a 12 p.G12A c.35G>C 565
2 p.G12V c.35G>T 566
3 p.G12R c.34G>C 561
4 p.G12C c.34G>T 562
5 NC12b p.G12D c.35G>A 564
6 p.G12S c.34G>A 563
7 NC13a 13 p.G13A c.38G>C 575
8 p.G13V c.38G>T 574
9 p.G13R c.37G>C 569
10 p.G13C c.37G>T 570
11 NC59 p.G13D c.38G>A 573
12 p.G13S c.37G>A 571
13 NC59 59 p.A59T c.175G>A 578
14 p.A59D c.176C>A 253327
15 p.A59A c.177T>C 1332932
16 NC61 61 p.Q61R c.182A>G 584
17 p.Q61K c.181C>A 580
18 p.Q61L c.182A>T 583
19 p.Q61H c.183A>T 585
20 p.Q61H c.183A>C 586
21 p.Q61P c.182A>C 582
22 p.Q61E c.181C>G 581
23 NC117 117 p.K117E c.349A>G
24 p.K117R c.350A>G
25 p.K117N c.351G>C
26 p.K117N c.351G>T
27 NC146 146 p.A146T c.436G>A 27174
28 p.A146P c.436G>C
29 p.A146S c.436G>T
30 p.A146V c.437C>T 4170228
31 p.A146G c.437C>G

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